From e32a26a22eac8983d9a333d0140fe6e89dc741ec Mon Sep 17 00:00:00 2001
From: Petr Wudi <wudipetr@fit.cvut.cz>
Date: Sat, 16 Dec 2017 20:46:38 +0100
Subject: [PATCH] Fix bad aligning in SmithWaterman

---
 .../fit/kw/vmm/backend/sequences_comparement/SmithWaterman.java | 2 ++
 1 file changed, 2 insertions(+)

diff --git a/src/main/java/edu/cvut/fit/kw/vmm/backend/sequences_comparement/SmithWaterman.java b/src/main/java/edu/cvut/fit/kw/vmm/backend/sequences_comparement/SmithWaterman.java
index 79507f4..7154476 100644
--- a/src/main/java/edu/cvut/fit/kw/vmm/backend/sequences_comparement/SmithWaterman.java
+++ b/src/main/java/edu/cvut/fit/kw/vmm/backend/sequences_comparement/SmithWaterman.java
@@ -95,6 +95,8 @@ public class SmithWaterman extends AbstractSequenceComparator implements Sequenc
                     return operations;
             }
         }
+        xBeginning = x;
+        yBeginning = y;
         return operations;
     }
 }
-- 
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