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    CXX=gcc
CXXFLAGS=-Wall -pedantic
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    Makefile test case  
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    SEQ=ATGCCCTATACCTATGATTATCCGCGCCCTGGTCTTACCGTTGACTGCGTGGTGTTTGGCCTAGACGAACAGATCGATCTCAAAGTCCTACTGATTCAGCGCCAGATTCCCCCTTTCCAGCATCAGTGGGCATTACCCGGAGGCTTTGTGCAGATGGATGAATCTTTAGAAGACGCGGCTCGCCGGGAGCTGCGAGAAGAAACGGGGGTTCAGGGTATTTTCCTAGAGCAGCTCTATACCTTTGGCGATTTGGGTCGAGATCCGCGCGATCGCATCATCTCCGTTGCCTACTACGCTCTAATCAACCTCATCGAATATCCTTTACAAGCCTCTACTGATGCTGAAGACGCAGCCTGGTACTCCATTGAGAATTTGCCATCTCTAGCTTTTGATCATGCTCAAATCTTGAAACAGGCCATCCGGCGATTGCAGGGCAAAGTTCGCTACGAACCGATTGGCTTCGAACTACTGCCGCAAAAATTTACACTCACCCAAATTCAGCAGCTTTACGAAACAGTTCTTGGCCATCCTCTAGATAAACGGAACTTTCGTAAGAAATTGCTAAAAATGGATCTCTTAATTCCCCTTGATGAGCAACAAACTGGAGTTGCTCATCGTGCTGCCAGACTCTATCAGTTCGACCAAAGCAAATACGAGCTATTGAAACAACAGGGATTTAACTTCGAGGTTTGA
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all:  prg
run:  prg   ; ./prg 1 2 3 4 10 $(SEQ)
prg:  dtw.c ; $(CXX) dtw.c -o prg
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    clean:      ; rm -f a.out prg *~